1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g43800.1

LOC_Os03g43800.1 (ATALY3, ALY3, LOC_Os03g43800)


Aliases : ATALY3, ALY3, LOC_Os03g43800

Description : transcription factor (MYB-related)


Gene families : OG0002386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002386_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g43800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00125820 ATALY3, ALY3,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT3G05380 ATALY2, ALY2 DIRP ;Myb-like DNA-binding domain 0.1 OrthoFinder output from all 47 species
AT3G21430 ATALY3, ALY3 No description available 0.09 OrthoFinder output from all 47 species
Adi_g019378 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
Aev_g48648 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.02 OrthoFinder output from all 47 species
Ceric.20G005600.1 ATALY3, ALY3,... MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
Cre13.g570150 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Dcu_g07164 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01017770001 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
Lfl_g02449 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.04 OrthoFinder output from all 47 species
MA_10427106g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_162771g0010 ATALY3, ALY3 Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_170387g0010 ATALY3, ALY3 Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g06450.1 ATALY3, ALY3 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Pir_g22841 ATALY2, ALY2 MYB-RELATED transcription factor *(ALY) & original... 0.02 OrthoFinder output from all 47 species
Smo420594 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Solyc12g098160.2.1 ATALY3, ALY3,... transcription factor (MYB-related) 0.06 OrthoFinder output from all 47 species
Zm00001e016566_P004 ALY1, ATALY1,... transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e041708_P001 ATALY3, ALY3,... transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR033471 DIRP 715 815
No external refs found!