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  5. LOC_Os03g42820.2

LOC_Os03g42820.2 (LOC_Os03g42820)


Aliases : LOC_Os03g42820

Description : ubiquitin receptor regulatory protein (DA1)


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g42820.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g105104 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19088.t1 Aspi01Gene19088 ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g052910.4.1 DAR2, Solyc05g052910 ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species
Tin_g02734 No alias ubiquiTin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09012 No alias ubiquiTin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005086_P004 Zm00001e005086 ubiquitin receptor regulatory protein (DA1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR022087 DA1-like_dom 291 503
IPR001781 Znf_LIM 142 196
No external refs found!