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  5. LOC_Os03g39740.2

LOC_Os03g39740.2 (LOC_Os03g39740)


Aliases : LOC_Os03g39740

Description : no hits & (original description: none)


Gene families : OG0004380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g39740.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00231350 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g07413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009690001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_19139 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_25851 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_124485g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_45158g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g04690.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g080200.4.1 Solyc04g080200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g092510.3.1 Solyc09g092510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002120_P003 Zm00001e002120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025613_P002 Zm00001e025613 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!