LOC_Os03g39520.1 (LOC_Os03g39520)


Aliases : LOC_Os03g39520

Description : Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana (sp|p0c897|y3264_arath : 338.0)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g39520.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068990 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g06779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08488.t1 Aspi01Gene08488 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08489.t1 Aspi01Gene08489 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48417.t1 Aspi01Gene48417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022062001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08670 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g21710.1 LOC_Os01g21710 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
LOC_Os12g32900.1 LOC_Os12g32900 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g32920.1 LOC_Os12g32920 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Lfl_g23654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g28190.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g50677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014020_P001 Zm00001e014020 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 89 566
No external refs found!