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Aliases : LOC_Os03g31594
Description : histone demethylase (KDM3). transcription factor (JUMONJI)
Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g31594.1 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00271780 | B160,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00058110 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00058780 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00206860 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.JUMONJI... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G11950 | No alias | Transcription factor jumonji (jmjC) domain-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G00990 | No alias | Transcription factor jumonji (jmjC) domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007698 | No alias | auxiliary component *(JMJ24) of COMPASS histone... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g009709 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g020581 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059802 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086369 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g113607 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g17454 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g11073 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g11281 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16620 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20293 | No alias | histone demethylase *(KDM3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g23114 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09074 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g20572 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03237 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19024 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70469 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene42684.t1 | Aspi01Gene42684 | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene42684.t2 | Aspi01Gene42684 | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene49323.t1 | Aspi01Gene49323 | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63285.t1 | Aspi01Gene63285 | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0034.g025236 | No alias | histone demethylase *(KDM3) & original description: CDS=125-3187 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0314.g064244 | No alias | histone demethylase *(KDM3) & original description: CDS=76-4551 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0548.g076441 | No alias | histone demethylase *(KDM3) & original description: CDS=709-3096 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05973 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31854 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G031200.1 | Ceric.06G031200 | histone demethylase *(KDM3) & original description:... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.11G069000.1 | Ceric.11G069000 | histone demethylase *(KDM3) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G018000.1 | Ceric.21G018000 | histone demethylase *(KDM3) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G078400.1 | Ceric.21G078400 | histone demethylase *(KDM3) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g16289 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12281 | No alias | histone demethylase *(KDM3) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g25444 | No alias | auxiliary component *(JMJ24) of COMPASS histone... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g41882 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05376 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12667 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09266 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21794 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g27471 | No alias | histone demethylase *(KDM3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01031115001 | No alias | Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Len_g08650 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g12082 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18303 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g50090 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04275 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g40363 | No alias | histone demethylase *(KDM3) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| MA_103030g0010 | No alias | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.11 | OrthoFinder output from all 47 species | |
| MA_126442g0010 | No alias | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.04 | OrthoFinder output from all 47 species | |
| MA_136209g0010 | No alias | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.06 | OrthoFinder output from all 47 species | |
| Mp3g05610.1 | No alias | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g20297 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25890 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05897 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g08776 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13618 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09343 | No alias | histone demethylase *(KDM3) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g25616 | No alias | histone demethylase *(KDM3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g30156 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g45466 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g05001 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15776 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g41007 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19483 | No alias | auxiliary component *(JMJ24) of COMPASS histone... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11101 | No alias | histone demethylase *(KDM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31029 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003123 | No alias | histone demethylase *(KDM3) & original description: CDS=1-2763 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29690 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40489 | No alias | histone demethylase *(KDM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g51855 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g078790.4.1 | Solyc02g078790 | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.1 | OrthoFinder output from all 47 species | |
| Solyc02g079300.3.1 | B160, Solyc02g079300 | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g18734 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21917 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g48969 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12985 | No alias | histone demethylase *(KDM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17158 | No alias | histone demethylase *(KDM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010541_P001 | Zm00001e010541 | histone demethylase (KDM3) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023535_P001 | Zm00001e023535 | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025393_P001 | Zm00001e025393 | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e038213_P003 | Zm00001e038213 | histone demethylase (KDM3). transcription factor (JUMONJI) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| No external refs found! |