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  5. LOC_Os03g31360.1

LOC_Os03g31360.1 (CRU1, CRA1, ATCRA1,...)


Aliases : CRU1, CRA1, ATCRA1, LOC_Os03g31360

Description : Glutelin type-A 3 OS=Oryza sativa subsp. japonica (sp|q09151|glua3_orysj : 902.0)


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g31360.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G03880 CRU2, CRB cruciferin 2 0.02 OrthoFinder output from all 47 species
AT1G03890 No alias RmlC-like cupins superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G28520 CRU3, CRC cruciferin 3 0.02 OrthoFinder output from all 47 species
AT5G44120 CRU1, CRA1, ATCRA1 RmlC-like cupins superfamily protein 0.02 OrthoFinder output from all 47 species
GSVIVT01028341001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
Zm00001e029673_P002 Zm00001e029673 Glutelin type-B 4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 319 466
IPR006045 Cupin_1 51 209
No external refs found!