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  5. LOC_Os03g29770.1

LOC_Os03g29770.1 (LOC_Os03g29770)


Aliases : LOC_Os03g29770

Description : no hits & (original description: none)


Gene families : OG0001759 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g29770.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00192350 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aop_g07417 No alias SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46298.t1 Aspi01Gene46298 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66532.t1 Aspi01Gene66532 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66533.t1 Aspi01Gene66533 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66534.t1 Aspi01Gene66534 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66535.t1 Aspi01Gene66535 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66536.t1 Aspi01Gene66536 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66539.t1 Aspi01Gene66539 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66541.t1 Aspi01Gene66541 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66542.t1 Aspi01Gene66542 SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G022900.1 Ceric.16G022900 SRC2-clade calcium sensor & original description:... 0.04 OrthoFinder output from all 47 species
LOC_Os09g30506.1 LOC_Os09g30506 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31000.1 LOC_Os09g31000 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g31025.1 LOC_Os09g31025 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08953 No alias SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008089 No alias SRC2-clade calcium sensor & original description: CDS=1-429 0.02 OrthoFinder output from all 47 species
Solyc03g031630.3.1 Solyc03g031630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g37762 No alias SRC2-clade calcium sensor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 27 101
No external refs found!