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  5. LOC_Os03g29260.2

LOC_Os03g29260.2 (LOC_Os03g29260)


Aliases : LOC_Os03g29260

Description : component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex


Gene families : OG0001031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g29260.2
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00211240 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1B... 0.02 OrthoFinder output from all 47 species
AT5G19510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.03 OrthoFinder output from all 47 species
Adi_g102190 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Adi_g102191 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Aev_g46718 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Aop_g00342 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Aop_g17687 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Ceric.23G080700.1 Ceric.23G080700 component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Ceric.32G024000.1 Ceric.32G024000 component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.158 No alias Protein biosynthesis.translation elongation.eEF1B... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001126.9 No alias Protein biosynthesis.translation elongation.eEF1B... 0.02 OrthoFinder output from all 47 species
Dac_g18134 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Dcu_g23644 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
GSVIVT01008526001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.03 OrthoFinder output from all 47 species
Gb_07694 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.02 OrthoFinder output from all 47 species
Lfl_g24793 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
MA_102713g0020 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 OrthoFinder output from all 47 species
Mp8g01660.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
Msp_g10669 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Nbi_g06059 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Sam_g12733 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g14316 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g16177 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 OrthoFinder output from all 47 species
Sam_g17349 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Sam_g31515 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.02 OrthoFinder output from all 47 species
Solyc01g098000.3.1 Solyc01g098000 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 OrthoFinder output from all 47 species
Solyc11g072190.2.1 Solyc11g072190 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
Spa_g07922 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Spa_g07923 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Spa_g12874 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 OrthoFinder output from all 47 species
Spa_g21700 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.08 OrthoFinder output from all 47 species
Spa_g44756 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Spa_g51035 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.09 OrthoFinder output from all 47 species
Tin_g14955 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Tin_g21340 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 OrthoFinder output from all 47 species
Zm00001e027167_P001 Zm00001e027167 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
Zm00001e035548_P001 Zm00001e035548 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species
Zm00001e035783_P001 Zm00001e035783 component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014038 EF1B_bsu/dsu_GNE 139 226
No external refs found!