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  5. LOC_Os03g27970.1

LOC_Os03g27970.1 (LOC_Os03g27970)


Aliases : LOC_Os03g27970

Description : component Prp17 of non-snRNP MOS4-associated complex


Gene families : OG0006597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g27970.1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000663.18 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g06482 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Pir_g04813 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g07836 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Tin_g01996 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquiTin... 0.02 OrthoFinder output from all 47 species
Zm00001e001921_P002 Zm00001e001921 component Prp17 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species
Zm00001e038006_P002 Zm00001e038006 component Prp17 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 317 354
IPR001680 WD40_repeat 495 530
IPR001680 WD40_repeat 402 439
IPR001680 WD40_repeat 273 311
No external refs found!