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  5. LOC_Os03g27860.1

LOC_Os03g27860.1 (LOC_Os03g27860)


Aliases : LOC_Os03g27860

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g27860.1

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g07820.1 LOC_Os01g07820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g20190.1 LOC_Os01g20190 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g46330.1 LOC_Os01g46330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g71910.1 LOC_Os01g71910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g74210.1 LOC_Os01g74210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g16590.1 LOC_Os02g16590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g24310.1 LOC_Os02g24310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g25520.1 LOC_Os02g25520 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g37620.1 LOC_Os02g37620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g27520.1 LOC_Os03g27520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43280.1 LOC_Os03g43280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g54020.1 LOC_Os03g54020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g10020.1 LOC_Os04g10020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g19000.1 LOC_Os04g19000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g23250.1 LOC_Os04g23250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g25590.1 LOC_Os04g25590 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g29820.1 LOC_Os04g29820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g14000.1 LOC_Os05g14000 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g18570.1 LOC_Os05g18570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g19700.1 LOC_Os05g19700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g24630.1 LOC_Os05g24630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g15050.1 LOC_Os06g15050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g16900.1 LOC_Os06g16900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g09540.1 LOC_Os07g09540 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g17510.1 LOC_Os07g17510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g34200.1 LOC_Os07g34200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g03730.1 LOC_Os08g03730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g10230.1 LOC_Os08g10230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g16080.1 LOC_Os08g16080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g24250.1 LOC_Os08g24250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g01900.1 LOC_Os09g01900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g14260.1 LOC_Os09g14260 Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g16890.1 LOC_Os09g16890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g07562.1 LOC_Os10g07562 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g03950.1 LOC_Os11g03950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g12780.1 LOC_Os11g12780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g26080.1 LOC_Os11g26080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g40960.1 LOC_Os11g40960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g43430.1 LOC_Os11g43430 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g03770.1 LOC_Os12g03770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g16400.1 LOC_Os12g16400 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g24680.1 LOC_Os12g24680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g31980.1 LOC_Os12g31980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 842 954
No external refs found!