LOC_Os03g27120.1 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1, LOC_Os03g27120

Description : MCP1 programmed cell death metacaspase-like regulator


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g27120.1

Target Alias Description ECC score Gene Family Method Actions
AT4G25110 AtMC2, MC2 metacaspase 2 0.03 OrthoFinder output from all 47 species
Aspi01Gene43398.t1 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Ceric.29G073300.1 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.04 OrthoFinder output from all 47 species
Len_g50239 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
MA_9247617g0010 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Pnu_g09219 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
Ppi_g05686 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Smo104974 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.02 OrthoFinder output from all 47 species
Solyc01g105310.3.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.07 OrthoFinder output from all 47 species
Solyc01g105320.4.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e001877_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.06 OrthoFinder output from all 47 species
Zm00001e001879_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Zm00001e037833_P003 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e037977_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!