LOC_Os02g04320.1


Description : scaffolding component Sec13 of coat protein complex


Gene families : OG_01_0002497 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002497_tree ,
OG_02_0002542 (LandPlants) Phylogenetic Tree(s): OG_02_0002542_tree ,
OG_03_0004509 (SeedPlants) Phylogenetic Tree(s): OG_03_0004509_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g04320.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00063600 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
AT2G30050 No alias transducin family protein / WD-40 repeat family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000939.9 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
Cre17.g715750 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
Pp3c19_9370V3.1 No alias transducin family protein / WD-40 repeat family protein 0.03 Archaeplastida
Zm00001e016458_P001 No alias scaffolding component Sec13 of coat protein complex 0.03 Archaeplastida
Zm00001e026053_P001 No alias scaffolding component Sec13 of coat protein complex 0.03 Archaeplastida
AMTR_s00030p00063600 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 LandPlants
AT2G30050 No alias transducin family protein / WD-40 repeat family protein 0.03 LandPlants
GSVIVT01014715001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 LandPlants
Pp3c19_9370V3.1 No alias transducin family protein / WD-40 repeat family protein 0.03 LandPlants
Zm00001e016458_P001 No alias scaffolding component Sec13 of coat protein complex 0.03 LandPlants
Zm00001e026053_P001 No alias scaffolding component Sec13 of coat protein complex 0.02 LandPlants
AMTR_s00030p00063600 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 SeedPlants
AT2G30050 No alias transducin family protein / WD-40 repeat family protein 0.03 SeedPlants
GSVIVT01014715001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 SeedPlants
Solyc03g120900.3.1 No alias scaffolding component Sec13 of coat protein complex 0.01 SeedPlants
Zm00001e016458_P001 No alias scaffolding component Sec13 of coat protein complex 0.03 SeedPlants
Zm00001e026053_P001 No alias scaffolding component Sec13 of coat protein complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 145 195
IPR001680 WD40_repeat 8 37
IPR001680 WD40_repeat 210 244
IPR001680 WD40_repeat 46 85
IPR001680 WD40_repeat 96 132
No external refs found!