LOC_Os02g04270.1


Description : no hits & (original description: none)


Gene families : OG_01_0004366 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004366_tree ,
OG_02_0006277 (LandPlants) Phylogenetic Tree(s): OG_02_0006277_tree ,
OG_03_0007809 (SeedPlants) Phylogenetic Tree(s): OG_03_0007809_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g04270.1
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00229090 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AT5G64420 No alias DNA polymerase V family 0.25 Archaeplastida
Cpa|evm.model.tig00021108.9 No alias No description available 0.11 Archaeplastida
Cre01.g012350 No alias No description available 0.18 Archaeplastida
GSVIVT01038520001 No alias No description available 0.14 Archaeplastida
Gb_31883 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp5g07000.1 No alias no hits & (original description: none) 0.18 Archaeplastida
Pp3c13_11570V3.1 No alias DNA polymerase V family 0.18 Archaeplastida
Smo438609 No alias No description available 0.06 Archaeplastida
Solyc01g106220.4.1 No alias no hits & (original description: none) 0.15 Archaeplastida
Zm00001e013596_P001 No alias no hits & (original description: none) 0.24 Archaeplastida
AMTR_s00046p00229090 evm_27.TU.AmTr_v1... No description available 0.06 LandPlants
AT5G64420 No alias DNA polymerase V family 0.24 LandPlants
GSVIVT01038520001 No alias No description available 0.12 LandPlants
Gb_31883 No alias no hits & (original description: none) 0.03 LandPlants
Mp5g07000.1 No alias no hits & (original description: none) 0.17 LandPlants
Pp3c13_11570V3.1 No alias DNA polymerase V family 0.17 LandPlants
Smo438609 No alias No description available 0.06 LandPlants
Solyc01g106220.4.1 No alias no hits & (original description: none) 0.13 LandPlants
Zm00001e013596_P001 No alias no hits & (original description: none) 0.23 LandPlants
AMTR_s00046p00229090 evm_27.TU.AmTr_v1... No description available 0.06 SeedPlants
AT5G64420 No alias DNA polymerase V family 0.24 SeedPlants
GSVIVT01038520001 No alias No description available 0.12 SeedPlants
Gb_31883 No alias no hits & (original description: none) 0.03 SeedPlants
Gb_40438 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc01g106220.4.1 No alias no hits & (original description: none) 0.13 SeedPlants
Zm00001e013596_P001 No alias no hits & (original description: none) 0.23 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005730 nucleolus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007015 DNA_pol_V/MYBBP1A 176 1044
No external refs found!