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LOC_Os03g25970.1 (LOC_Os03g25970)


Aliases : LOC_Os03g25970

Description : KH domain-containing protein At4g18375 OS=Arabidopsis thaliana (sp|p58223|y4837_arath : 139.0)


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25970.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g04310 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g17355 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g04253 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene11146.t1 Aspi01Gene11146 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os01g13470.1 LOC_Os01g13470 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Lfl_g04773 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g11897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015180 No alias E3 ubiquitin ligase *(STUBL1/3) & original description:... 0.01 OrthoFinder output from all 47 species
Spa_g08106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36753 PEP not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001825_P001 Zm00001e001825 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e012623_P002 Zm00001e012623 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Zm00001e026127_P004 Zm00001e026127 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 366 433
IPR004088 KH_dom_type_1 282 330
IPR004088 KH_dom_type_1 139 206
IPR004088 KH_dom_type_1 42 95
No external refs found!