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  5. LOC_Os03g25869.1

LOC_Os03g25869.1 (LOC_Os03g25869)


Aliases : LOC_Os03g25869

Description : amino acid transporter (LAT)


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25869.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Aob_g17635 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61355.t1 Aspi01Gene61355 amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g292350 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc01g111800.4.1 Solyc01g111800 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
Spa_g53432 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015550_P001 Zm00001e015550 amino acid transporter (LAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 85 309
No external refs found!