LOC_Os03g25470.1 (COPT1, LOC_Os03g25470)

Aliases : COPT1, LOC_Os03g25470

Description : copper cation channel (COPT). copper transporter (COPT)

Gene families : OG0001223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g25470.1
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00165p00035200	evm_27.TU.AmTr_v1...	Nutrient uptake.copper uptake.reduction-based...	0.03	OrthoFinder output from all 47 species
Adi_g030094	COPT5	copper transporter *(COPT) & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g046008	COPT5	copper transporter *(COPT) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g02848	COPT2	copper transporter *(COPT) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G003900.1	COPT5, Ceric.12G003900	copper transporter *(COPT) & original description:...	0.02	OrthoFinder output from all 47 species
Dcu_g15544	COPT1	copper transporter *(COPT) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015065001	No alias	Nutrient uptake.copper uptake.reduction-based...	0.03	OrthoFinder output from all 47 species
Solyc10g084980.3.1	COPT2, Solyc10g084980	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005375	copper ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006825	copper ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0035434	copper ion transmembrane transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007274	Cop_transporter	34	88
IPR007274	Cop_transporter	92	144

External Links

No external refs found!

LOC_Os03g25470.1 (COPT1, LOC_Os03g25470)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation