LOC_Os03g25120.1 (HSFB4, SCZ, AT-HSFB4,...)

Aliases : HSFB4, SCZ, AT-HSFB4, LOC_Os03g25120

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g25120.1
Cluster	HCCA: Cluster_490

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00073p00033500	HSFB4, SCZ,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	OrthoFinder output from all 47 species
Adi_g076259	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g085654	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Als_g37067	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g41074	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g07907	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene22943.t1	HSFB4, SCZ,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene55061.t1	HSFB4, SCZ,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56974.t1	AT-HSFA6B,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01002066001	AT-HSFB2A, HSFB2A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
GSVIVT01033257001	AT-HSFB3, HSFB3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	OrthoFinder output from all 47 species
Gb_11758	AT-HSFA6B, HSFA6B	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	OrthoFinder output from all 47 species
Gb_19891	HSFA1B, ATHSF3,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g43590.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.06	OrthoFinder output from all 47 species
LOC_Os03g53340.2	AT-HSFA6B,...	transcription factor (HSF)	0.07	OrthoFinder output from all 47 species
LOC_Os08g43334.1	AT-HSFB2A,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
Len_g29724	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g26021	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
MA_110587g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Nbi_g11876	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g38071	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo107503	ATHSF1, HSF1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Solyc03g097120.3.1	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.01	OrthoFinder output from all 47 species
Solyc04g016000.3.1	AT-HSFB3, HSFB3,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Solyc06g053950.3.1	AT-HSFA6B,...	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Spa_g17508	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26714	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e003755_P002	AT-HSFB2A,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
Zm00001e004752_P001	AT-HSFA6B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e024268_P001	AT-HSFB2A,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
Zm00001e037165_P002	AT-HSFA7A,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
Zm00001e041441_P001	AT-HSFB2A,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	37	126

External Links

No external refs found!

LOC_Os03g25120.1 (HSFB4, SCZ, AT-HSFB4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation