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  5. LOC_Os03g24580.1

LOC_Os03g24580.1 (LOC_Os03g24580)


Aliases : LOC_Os03g24580

Description : no hits & (original description: none)


Gene families : OG0005575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g24580.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g00747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28070 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G037700.1 Ceric.10G037700 not classified & original description: pacid=50612409... 0.04 OrthoFinder output from all 47 species
Cre07.g351700 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g14519 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035992001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_01078 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo402529 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e038165_P002 Zm00001e038165 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR009445 TMEM85/Emc4 51 159
No external refs found!