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  5. LOC_Os03g24180.1

LOC_Os03g24180.1 (LOC_Os03g24180)


Aliases : LOC_Os03g24180

Description : Rho GTPase-activating protein 7 OS=Arabidopsis thaliana (sp|q8rwq4|rgap7_arath : 785.0)


Gene families : OG0001811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g24180.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00197920 evm_27.TU.AmTr_v1... Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT4G24580 REN1 Rho GTPase activation protein (RhoGAP) with PH domain 0.04 OrthoFinder output from all 47 species
AT5G12150 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.03 OrthoFinder output from all 47 species
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.08 OrthoFinder output from all 47 species
Adi_g057671 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20968 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11123 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70602 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023819 No alias ROP-activating protein *(RenGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0173.g055873 No alias ROP-activating protein *(RenGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g16444 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37461 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G024700.1 Ceric.01G024700 ROP-activating protein *(RenGAP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.11G041800.1 Ceric.11G041800 ROP-activating protein *(RenGAP) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g09456 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01869 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01978 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00934 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003597001 REN1 Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os03g11140.1 REN1, LOC_Os03g11140 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os03g15180.1 REN1, LOC_Os03g15180 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g39495 No alias ROP-activating protein *(RenGAP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435072g0010 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_181127g0010 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_540526g0010 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g09680.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g16703 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03788 No alias ROP-activating protein *(RenGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g12960 No alias ROP-activating protein *(RenGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29654 No alias ROP-activating protein *(RenGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13925 No alias ROP-activating protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008570 No alias ROP-activating protein *(RenGAP) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g39070 No alias ROP-activating protein *(RenGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Smo442380 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g008770.3.1 Solyc01g008770 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Spa_g30873 No alias ROP-activating protein *(RenGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19281 No alias ROP-activaTing protein *(RenGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001710_P001 Zm00001e001710 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e036715_P004 REN1, Zm00001e036715 Rho GTPase-activating protein REN1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 621 701
IPR001849 PH_domain 28 132
IPR000198 RhoGAP_dom 189 333
No external refs found!