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  5. LOC_Os03g23980.1

LOC_Os03g23980.1 (LOC_Os03g23980)


Aliases : LOC_Os03g23980

Description : Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana (sp|o80934|y2766_arath : 82.4)


Gene families : OG0005983 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g23980.1

Target Alias Description ECC score Gene Family Method Actions
AT4G31530 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g020005 No alias regulatory protein *(ROQH1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Aop_g21962 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Aspi01Gene20838.t1 Aspi01Gene20838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25947 No alias regulatory protein *(ROQH1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Ceric.21G005600.1 Ceric.21G005600 regulatory protein *(ROQH1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000796.24 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g21767 No alias regulatory protein *(ROQH1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Dcu_g39976 No alias regulatory protein *(ROQH1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Dde_g02054 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ehy_g03464 No alias regulatory protein *(ROQH1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Gb_25708 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g09850.1 No alias Uncharacterized protein At2g37660, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g16514 No alias regulatory protein *(ROQH1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ore_g26502 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Pir_g07945 No alias regulatory protein *(ROQH1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ppi_g05065 No alias regulatory protein *(ROQH1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Sam_g24241 No alias regulatory protein *(ROQH1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Sam_g50671 No alias regulatory protein *(ROQH1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Solyc01g008920.4.1 Solyc01g008920 Uncharacterized protein At2g37660, chloroplastic... 0.05 OrthoFinder output from all 47 species
Tin_g28985 No alias regulatory protein *(ROQH1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Zm00001e038183_P001 Zm00001e038183 Uncharacterized protein At2g37660, chloroplastic... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 91 299
No external refs found!