LOC_Os03g22160.1 (RSH1, ATRSH1,...)


Aliases : RSH1, ATRSH1, AT-RSH1, LOC_Os03g22160

Description : Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica (sp|q9ayt5|rsh1_orysj : 1750.0)


Gene families : OG0007704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007704_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22160.1

Target Alias Description ECC score Gene Family Method Actions
AT4G02260 RSH1, ATRSH1, AT-RSH1 RELA/SPOT homolog 1 0.05 OrthoFinder output from all 47 species
Aev_g45058 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01958 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07422 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13069 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53667.t2 RSH1, ATRSH1,... ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035825 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: CDS=212-2167 0.05 OrthoFinder output from all 47 species
Cba_g03393 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G066100.1 RSH1, ATRSH1,... ppGpp hydrolase *(RSH1) & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g23400 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02008 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48904 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028045001 RSH1, ATRSH1, AT-RSH1 Putative GTP diphosphokinase RSH1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g17577 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g03474 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g07090.1 RSH1, ATRSH1, AT-RSH1 Putative GTP diphosphokinase RSH1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g15202 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01441 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41028 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12213 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19490 No alias ppGpp hydrolase *(RSH1) & original description: none 0.07 OrthoFinder output from all 47 species
Solyc09g075390.4.1 RSH1, ATRSH1,... Putative GTP diphosphokinase RSH1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc09g098580.3.1 RSH1, ATRSH1,... Putative GTP diphosphokinase RSH1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g12236 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28376 RSH1, ATRSH1, AT-RSH1 ppGpp hydrolase *(RSH1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001610_P003 RSH1, ATRSH1,... Putative GTP diphosphokinase RSH1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR004095 TGS 578 636
IPR007685 RelA_SpoT 391 507
No external refs found!