Aliases : LOC_Os03g20870
Description : E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica (sp|q6avn2|sirp1_orysj : 125.0)
Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00263520 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g008105 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g012552 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g017038 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g019629 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g103586 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g03172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g05398 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g03741 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g13383 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g14287 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g46210 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g03081 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g05181 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g27273 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene33056.t1 | Aspi01Gene33056 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0241.g059757 | No alias | not classified & original description: CDS=1-1179 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g62505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.14G002100.1 | Ceric.14G002100 | not classified & original description: pacid=50633322... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000571.7 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g07739 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g32136 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g05277 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g01127 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g01134 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g01160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g03331 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g11152 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Gb_22124 | No alias | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.04 | OrthoFinder output from all 47 species | |
Gb_30381 | RHC1A | Probable E3 ubiquitin-protein ligase RHC2A... | 0.02 | OrthoFinder output from all 47 species | |
Len_g56498 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g29620 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g30265 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g40832 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_413614g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_8499g0020 | CIP8 | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Mp8g17140.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g13924 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g23146 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g23756 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g24146 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g25444 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g55440 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g62548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0035.g011411 | No alias | not classified & original description: CDS=1-1419 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0036.g011589 | No alias | not classified & original description: CDS=1-987 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g05103 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g17099 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g009000.3.1 | RHC1A, Solyc01g009000 | Probable E3 ubiquitin-protein ligase RHC1A... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g008440.1.1 | Solyc12g008440 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05315 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g04049 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g32009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016135_P001 | Zm00001e016135 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e036731_P001 | Zm00001e036731 | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038273_P001 | Zm00001e038273 | E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0061630 | ubiquitin protein ligase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0004605 | phosphatidate cytidylyltransferase activity | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
BP | GO:0006655 | phosphatidylglycerol biosynthetic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032048 | cardiolipin metabolic process | IEP | HCCA |
BP | GO:0032049 | cardiolipin biosynthetic process | IEP | HCCA |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
BP | GO:0046471 | phosphatidylglycerol metabolic process | IEP | HCCA |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0070567 | cytidylyltransferase activity | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |