LOC_Os08g15460 (Os08g0254500)


Aliases : Os08g0254500

Description : 29.3.3 protein.targeting.chloroplast Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. SECY homolog 1 (SCY1)


Gene families : OG_01_0006783 (Gene family) Phylogenetic Tree(s): OG0006783_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g15460
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT2G18710 SCY1 SECY homolog 1 0.02 Gene family
Cre16.g681900 No alias 29.3.3 protein.targeting.chloroplast Encodes a component... 0.11 Gene family
GSVIVT01032310001 No alias 29.3.3 protein.targeting.chloroplast Encodes a component... 0.07 Gene family
Solyc07g006520.3.1 Solyc07g006520.3 29.3.3 protein.targeting.chloroplast Encodes a component... 0.09 Gene family
Zm00001d000349 No alias 29.3.3 protein.targeting.chloroplast Encodes a component... 0.09 Gene family
Zm00001d000350 GRMZM5G809546 29.3.3 protein.targeting.chloroplast Encodes a component... 0.1 Gene family

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 199 530
No external refs found!