1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g19780.1

LOC_Os03g19780.1 (LOC_Os03g19780)


Aliases : LOC_Os03g19780

Description : transcription factor (bHLH)


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19780.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00143370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00044260 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G42870 PAR1, HLH1 phy rapidly regulated 1 0.03 OrthoFinder output from all 47 species
AT3G17100 No alias sequence-specific DNA binding transcription factors 0.04 OrthoFinder output from all 47 species
Ala_g32990 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20907 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25846 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03187 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05093 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59361.t1 Aspi01Gene59361 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29136 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G049700.1 Ceric.16G049700 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g09658 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14677 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_30108 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_41387 HLH2, PAR2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g14110.1 LOC_Os01g14110 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os01g43950.1 AIF1, LOC_Os01g43950 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g13942 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_96570g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g05867 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06707 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025428 No alias bHLH-type transcription factor & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species
Solyc01g058670.3.1 Solyc01g058670 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g08835 IBH1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37850 IBH1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38345 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41564 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001479_P001 Zm00001e001479 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e025908_P001 AIF1, Zm00001e025908 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e035917_P001 Zm00001e035917 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!