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  5. LOC_Os03g19760.1

LOC_Os03g19760.1 (LOC_Os03g19760)


Aliases : LOC_Os03g19760

Description : SOQ1 non-photochemical quenching regulator protein


Gene families : OG0003626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19760.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G56500 No alias haloacid dehalogenase-like hydrolase family protein 0.18 OrthoFinder output from all 47 species
Adi_g021878 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Aev_g14013 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g09026 No alias regulatory protein *(SOQ1) of non-photochemical... 0.08 OrthoFinder output from all 47 species
Als_g62032 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46305.t1 Aspi01Gene46305 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46306.t1 Aspi01Gene46306 regulatory protein *(SOQ1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Azfi_s0061.g034958 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ceric.02G025300.1 Ceric.02G025300 regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Ceric.06G023000.1 Ceric.06G023000 regulatory protein *(SOQ1) of non-photochemical... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.10 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Cre13.g586050 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g07066 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Dcu_g46221 No alias regulatory protein *(SOQ1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Dde_g18494 No alias regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Ehy_g18146 No alias regulatory protein *(SOQ1) of non-photochemical... 0.08 OrthoFinder output from all 47 species
GSVIVT01031253001 No alias Photosynthesis.photophosphorylation.photosystem... 0.12 OrthoFinder output from all 47 species
Gb_14671 No alias SOQ1 non-photochemical quenching regulator protein 0.08 OrthoFinder output from all 47 species
Len_g47037 No alias regulatory protein *(SOQ1) of non-photochemical... 0.09 OrthoFinder output from all 47 species
Lfl_g10265 No alias regulatory protein *(SOQ1) of non-photochemical... 0.09 OrthoFinder output from all 47 species
MA_10184459g0010 No alias SOQ1 non-photochemical quenching regulator protein 0.05 OrthoFinder output from all 47 species
MA_129620g0010 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp5g22510.1 No alias SOQ1 non-photochemical quenching regulator protein 0.05 OrthoFinder output from all 47 species
Msp_g13160 No alias regulatory protein *(SOQ1) of non-photochemical... 0.13 OrthoFinder output from all 47 species
Nbi_g39429 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ore_g09927 No alias regulatory protein *(SOQ1) of non-photochemical... 0.1 OrthoFinder output from all 47 species
Pir_g20017 No alias regulatory protein *(SOQ1) of non-photochemical... 0.15 OrthoFinder output from all 47 species
Pnu_g14012 No alias regulatory protein *(SOQ1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Ppi_g08248 No alias regulatory protein *(SOQ1) of non-photochemical... 0.08 OrthoFinder output from all 47 species
Sam_g50621 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Smo79954 No alias Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
Solyc01g100650.3.1 Solyc01g100650 SOQ1 non-photochemical quenching regulator protein 0.14 OrthoFinder output from all 47 species
Spa_g16040 No alias regulatory protein *(SOQ1) of non-photochemical... 0.12 OrthoFinder output from all 47 species
Tin_g46320 No alias regulatory protein *(SOQ1) of non-photochemical... 0.09 OrthoFinder output from all 47 species
Zm00001e001473_P001 Zm00001e001473 SOQ1 non-photochemical quenching regulator protein 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
InterPro domains Description Start Stop
IPR001258 NHL_repeat 808 833
IPR001258 NHL_repeat 626 651
IPR012336 Thioredoxin-like_fold 424 519
IPR041492 HAD_2 83 266
No external refs found!