LOC_Os03g18740.1 (LOC_Os03g18740)


Aliases : LOC_Os03g18740

Description : Sex determination protein tasselseed-2 OS=Zea mays (sp|p50160|ts2_maize : 368.0)


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18740.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00118310 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G47130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.03 OrthoFinder output from all 47 species
AT3G51680 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G03140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g14817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71697.t1 Aspi01Gene71697 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71700.t1 Aspi01Gene71700 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G011800.1 Ceric.05G011800 not classified & original description: pacid=50577508... 0.03 OrthoFinder output from all 47 species
Ceric.17G054700.1 Ceric.17G054700 not classified & original description: pacid=50617562... 0.03 OrthoFinder output from all 47 species
Dac_g09505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38597 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008067001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 OrthoFinder output from all 47 species
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033911001 No alias Tropinone reductase-like 1 OS=Erythroxylum coca 0.03 OrthoFinder output from all 47 species
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_17570 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_30885 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_31399 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32338 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_36105 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_40683 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g33240.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os11g32030.1 LOC_Os11g32030 Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g16010.1 LOC_Os12g16010 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g38241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435071g0010 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10436701g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_109050g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g13051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026191 No alias not classified & original description: CDS=1-561 0.05 OrthoFinder output from all 47 species
Smo139060 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g005500.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.05 OrthoFinder output from all 47 species
Solyc11g018600.1.1 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g056610.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Spa_g12161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035437_P002 Zm00001e035437 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Zm00001e038385_P001 Zm00001e038385 Sex determination protein tasselseed-2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 55 246
No external refs found!