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  5. LOC_Os03g18180.1

LOC_Os03g18180.1 (LOC_Os03g18180)


Aliases : LOC_Os03g18180

Description : GTPase activation accessory protein (RanBP1)


Gene families : OG0001732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g18180.1

Target Alias Description ECC score Gene Family Method Actions
AT1G07140 SIRANBP Pleckstrin homology (PH) domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G30060 No alias Pleckstrin homology (PH) domain superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g059522 No alias Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
Adi_g105080 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Aev_g05807 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g01392 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Als_g37024 No alias Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Aob_g00725 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
Aop_g05870 No alias Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g12282 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g12283 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g23036 No alias Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.09G056500.1 RANBP1, Ceric.09G056500 Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.30G048500.1 Ceric.30G048500 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.36 SIRANBP Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021612.44 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g08112 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11845 No alias Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g48388 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01024705001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Gb_26663 RANBP1 GTPase activation accessory protein (RanBP1) 0.04 OrthoFinder output from all 47 species
Len_g08715 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g31127 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Mp2g00160.1 No alias GTPase activation accessory protein (RanBP1) 0.04 OrthoFinder output from all 47 species
Msp_g12271 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g00331 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07590 No alias Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g18931 No alias Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g082120.4.1 Solyc06g082120 GTPase activation accessory protein (RanBP1) 0.02 OrthoFinder output from all 47 species
Solyc08g062660.3.1 RANBP1, Solyc08g062660 GTPase activation accessory protein (RanBP1) 0.04 OrthoFinder output from all 47 species
Spa_g07189 No alias Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e001322_P001 Zm00001e001322 GTPase activation accessory protein (RanBP1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 40 157
No external refs found!