LOC_Os03g17960.1 (LOC_Os03g17960)


Aliases : LOC_Os03g17960

Description : no hits & (original description: none)


Gene families : OG0008660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008660_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g17960.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00129180 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AT5G62550 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.13 OrthoFinder output from all 47 species
Aev_g39004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32687 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g15950 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g14333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G020000.1 Ceric.20G020000 not classified & original description: pacid=50567534... 0.1 OrthoFinder output from all 47 species
Dac_g07000 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008044001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_30698 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g35094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_49755g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Msp_g13900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06283 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g41481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g113090.3.1 Solyc03g113090 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc06g070970.3.1 Solyc06g070970 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g07115 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g11921 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!