1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g17610.1

LOC_Os03g17610.1 (BIN5, RHL2, LOC_Os03g17610)


Aliases : BIN5, RHL2, LOC_Os03g17610

Description : DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp. indica (sp|a2xfc1|top6a_orysi : 766.0)


Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g17610.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene12610.t1 BIN5, RHL2,... component *(TOP6A) of somatic DNA topoisomerase VI... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50322.t1 SPO11-2, Aspi01Gene50322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00979 BIN5, RHL2 component *(TOP6A) of somatic DNA topoisomerase VI... 0.02 OrthoFinder output from all 47 species
Dde_g47424 ATSPO11-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019418001 SPO11-2 Cell cycle.mitosis and meiosis.meiotic... 0.05 OrthoFinder output from all 47 species
MA_8091373g0010 BIN5, RHL2 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g08108 BIN5, RHL2 component *(TOP6A) of somatic DNA topoisomerase VI... 0.02 OrthoFinder output from all 47 species
Ppi_g02931 BIN5, RHL2 component *(TOP6A) of somatic DNA topoisomerase VI... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g004994 BIN5, RHL2 component *(TOP6A) of somatic DNA topoisomerase VI... 0.02 OrthoFinder output from all 47 species
Sam_g15438 No alias component *(TOP6A) of somatic DNA topoisomerase VI... 0.03 OrthoFinder output from all 47 species
Sam_g44055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo424976 ATSPO11-1 Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g065440.4.1 ATSPO11-1, Solyc07g065440 Meiotic recombination protein SPO11-1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006259 DNA metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 156 217
No external refs found!