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  5. LOC_Os03g16800.1

LOC_Os03g16800.1 (LOC_Os03g16800)


Aliases : LOC_Os03g16800

Description : component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g16800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AMTR_s00050p00195040 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
AMTR_s00106p00058730 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
AT1G03050 No alias ENTH/ANTH/VHS superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G25430 No alias epsin N-terminal homology (ENTH) domain-containing... 0.05 OrthoFinder output from all 47 species
AT4G02650 No alias ENTH/ANTH/VHS superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G25940 No alias ENTH/ANTH/VHS superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g015730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g055262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13981.t1 Aspi01Gene13981 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39677.t1 Aspi01Gene39677 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40710.t1 Aspi01Gene40710 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029866 No alias not classified & original description: CDS=1-1461 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.03 OrthoFinder output from all 47 species
Cba_g70257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G099900.1 Ceric.04G099900 not classified & original description: pacid=50631667... 0.02 OrthoFinder output from all 47 species
Ceric.06G031300.1 Ceric.06G031300 not classified & original description: pacid=50619961... 0.05 OrthoFinder output from all 47 species
Ceric.26G018700.1 Ceric.26G018700 not classified & original description: pacid=50599808... 0.03 OrthoFinder output from all 47 species
Ceric.34G007000.1 Ceric.34G007000 not classified & original description: pacid=50623589... 0.04 OrthoFinder output from all 47 species
Dac_g10551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04015 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06797 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015603001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Len_g11825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432705g0010 No alias Putative clathrin assembly protein At2g25430... 0.03 OrthoFinder output from all 47 species
MA_10435921g0010 No alias Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.04 OrthoFinder output from all 47 species
Nbi_g09369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001850 No alias not classified & original description: CDS=1-1887 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020948 No alias not classified & original description: CDS=2516-4330 0.02 OrthoFinder output from all 47 species
Sam_g07860 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07861 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07862 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g043810.4.1 Solyc02g043810 ECA1/2 clathrin coated vesicle adaptor protein 0.05 OrthoFinder output from all 47 species
Solyc06g011450.3.1 Solyc06g011450 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.05 OrthoFinder output from all 47 species
Solyc07g008060.1.1 Solyc07g008060 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Solyc08g059660.3.1 Solyc08g059660 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Solyc11g044860.3.1 Solyc11g044860 ECA1/2 clathrin coated vesicle adaptor protein 0.05 OrthoFinder output from all 47 species
Solyc12g006000.1.1 Solyc12g006000 clathrin assembly protein (AP180) 0.05 OrthoFinder output from all 47 species
Solyc12g010530.3.1 Solyc12g010530 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Tin_g01128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07524 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001222_P002 Zm00001e001222 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Zm00001e013776_P003 Zm00001e013776 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Zm00001e023668_P001 Zm00001e023668 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.06 OrthoFinder output from all 47 species
Zm00001e028613_P001 Zm00001e028613 Putative clathrin assembly protein At1g03050... 0.02 OrthoFinder output from all 47 species
Zm00001e029642_P001 Zm00001e029642 Putative clathrin assembly protein At2g25430... 0.03 OrthoFinder output from all 47 species
Zm00001e038481_P001 Zm00001e038481 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 31 356
No external refs found!