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  5. LOC_Os03g16730.1

LOC_Os03g16730.1 (LOC_Os03g16730)


Aliases : LOC_Os03g16730

Description : no hits & (original description: none)


Gene families : OG0002612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g16730.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Adi_g013885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0176.g056056 No alias not classified & original description: CDS=127-1527 0.02 OrthoFinder output from all 47 species
Dac_g04655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12672 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo445107 No alias No description available 0.04 OrthoFinder output from all 47 species
Spa_g08168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!