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  5. LOC_Os03g16290.1

LOC_Os03g16290.1 (LOC_Os03g16290)


Aliases : LOC_Os03g16290

Description : no hits & (original description: none)


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g16290.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00258400 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G00295 No alias No description available 0.02 OrthoFinder output from all 47 species
AT4G11350 No alias Protein of unknown function (DUF604) 0.03 OrthoFinder output from all 47 species
AT5G12460 No alias Protein of unknown function (DUF604) 0.04 OrthoFinder output from all 47 species
Adi_g000658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17858 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g11446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20843.t1 Aspi01Gene20843 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27633.t1 Aspi01Gene27633 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene35672.t1 Aspi01Gene35672 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59501.t1 Aspi01Gene59501 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59505.t1 Aspi01Gene59505 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g015970 No alias not classified & original description: CDS=592-2169 0.03 OrthoFinder output from all 47 species
Ceric.03G053300.1 Ceric.03G053300 not classified & original description: pacid=50572689... 0.04 OrthoFinder output from all 47 species
Ceric.31G043300.1 Ceric.31G043300 not classified & original description: pacid=50574070... 0.03 OrthoFinder output from all 47 species
Dac_g23791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019400001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01024903001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025084001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01034119001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_04360 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_04629 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_10284 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_12418 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36870 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39622 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g45700.1 LOC_Os02g45700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g03270.1 LOC_Os03g03270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g01341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_12294g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_66888g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7477879g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_89971g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g06254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000048 No alias not classified & original description: CDS=1-1572 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008392 No alias not classified & original description: CDS=1-1902 0.03 OrthoFinder output from all 47 species
Sam_g09207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo1345 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g006770.2.1 Solyc01g006770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc07g052650.2.1 Solyc07g052650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc11g065440.3.1 Solyc11g065440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g065470.2.1 Solyc11g065470 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc12g005730.2.1 Solyc12g005730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g056200.2.1 Solyc12g056200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g099680.1.1 Solyc12g099680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g099730.3.1 Solyc12g099730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g12649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007164_P001 Zm00001e007164 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038263_P001 Zm00001e038263 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041410_P001 Zm00001e041410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 2 121
No external refs found!