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  5. LOC_Os03g16150.2

LOC_Os03g16150.2 (EMB101, VTC1, SOZ1,...)


Aliases : EMB101, VTC1, SOZ1, CYT1, GMP1, LOC_Os03g16150

Description : GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose pyrophosphorylase (VTC1)


Gene families : OG0001826 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001826_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g16150.2

Target Alias Description ECC score Gene Family Method Actions
Als_g02992 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Als_g11094 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Als_g11095 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aob_g02953 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aob_g03191 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aop_g10205 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cre16.g672800 EMB101, VTC1,... Redox homeostasis.low-molecular-weight... 0.03 OrthoFinder output from all 47 species
Dcu_g13640 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Gb_41514 EMB101, VTC1,... GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose... 0.03 OrthoFinder output from all 47 species
Len_g56713 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Msp_g21533 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ore_g15629 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Ppi_g02040 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g08425 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Smo168373 EMB101, VTC1,... Redox homeostasis.low-molecular-weight... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001451 Hexapep 261 295
IPR005835 NTP_transferase_dom 2 229
No external refs found!