1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g15540.1

LOC_Os03g15540.1 (LOC_Os03g15540)


Aliases : LOC_Os03g15540

Description : no hits & (original description: none)


Gene families : OG0005260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005260_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g15540.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g008189 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
Aop_g07002 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
Ceric.27G000100.1 Ceric.27G000100 nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000237.33 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Dcu_g04972 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g104070.3.1 Solyc01g104070 IMB4 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Spa_g08434 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
Tin_g15675 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e001127_P004 Zm00001e001127 IMB4 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!