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  5. LOC_Os03g13310.1

LOC_Os03g13310.1 (AtMYB109, MYB109,...)


Aliases : AtMYB109, MYB109, LOC_Os03g13310

Description : transcription factor (MYB)


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g13310.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g103148 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.01 OrthoFinder output from all 47 species
Ala_g33950 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20384 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g23891 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g01771 MYB1, AtMYB1 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69491.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Azfi_s0145.g051658 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0179.g056258 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g03902 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dac_g46190 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dde_g42862 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02343 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Len_g27982 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
MA_120049g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g20543 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24734 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g20758 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g16792 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g26012 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pir_g27029 MYB1, AtMYB1 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Spa_g04996 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Spa_g05755 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39449 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48278 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.05 OrthoFinder output from all 47 species
Zm00001e017363_P001 AtMYB117, LOF1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 81 124
IPR001005 SANT/Myb 28 72
No external refs found!