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  5. LOC_Os03g12890.1

LOC_Os03g12890.1 (ATBCAT-3, BCAT3,...)


Aliases : ATBCAT-3, BCAT3, LOC_Os03g12890

Description : valine/leucine/isoleucine aminotransferase. valine/leucine/isoleucine aminotransferase. branched-chain aminotransferase (BCAT)


Gene families : OG0001757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g12890.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00197530 ATBCAT-3, BCAT3,... Amino acid metabolism.degradation.branched-chain amino... 0.04 OrthoFinder output from all 47 species
AT1G10060 BCAT-1, ATBCAT-1 branched-chain amino acid transaminase 1 0.04 OrthoFinder output from all 47 species
AT1G50090 No alias D-aminoacid aminotransferase-like PLP-dependent enzymes... 0.05 OrthoFinder output from all 47 species
AT3G19710 BCAT4 branched-chain aminotransferase4 0.06 OrthoFinder output from all 47 species
AT3G49680 ATBCAT-3, BCAT3 branched-chain aminotransferase 3 0.09 OrthoFinder output from all 47 species
Cba_g05771 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Dac_g18271 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.06 OrthoFinder output from all 47 species
Dcu_g16074 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009276001 BCAT-2, ATBCAT-2 Amino acid metabolism.degradation.branched-chain amino... 0.03 OrthoFinder output from all 47 species
Msp_g37425 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021829 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Sam_g12996 No alias EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Sam_g51432 No alias EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Solyc04g077250.4.1 BCAT-2,... valine/leucine/isoleucine aminotransferase.... 0.04 OrthoFinder output from all 47 species
Solyc07g021630.3.1 BCAT-2,... valine/leucine/isoleucine aminotransferase.... 0.06 OrthoFinder output from all 47 species
Solyc12g088220.2.1 BCAT-2,... valine/leucine/isoleucine aminotransferase.... 0.03 OrthoFinder output from all 47 species
Spa_g07802 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Zm00001e000927_P004 ATBCAT-3, BCAT3,... valine/leucine/isoleucine aminotransferase.... 0.03 OrthoFinder output from all 47 species
Zm00001e007274_P001 ATBCAT-3, BCAT3,... valine/leucine/isoleucine aminotransferase.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001544 Aminotrans_IV 132 373
No external refs found!