1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g11960.1

LOC_Os03g11960.1 (CSD3, LOC_Os03g11960)


Aliases : CSD3, LOC_Os03g11960

Description : copper/zinc superoxide dismutase


Gene families : OG0000525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g11960.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g02663 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.04 OrthoFinder output from all 47 species
Ceric.29G080900.1 CSD1, Ceric.29G080900 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000342.1 CSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.01 OrthoFinder output from all 47 species
Dcu_g20830 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Dde_g03599 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Pir_g22905 CSD1 copper/zinc superoxide dismutase *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g20621 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Solyc11g066390.2.1 CZSOD2, CSD2,... copper/zinc superoxide dismutase 0.05 OrthoFinder output from all 47 species
Spa_g03460 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.03 OrthoFinder output from all 47 species
Spa_g39585 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.02 OrthoFinder output from all 47 species
Spa_g46495 CSD1 EC_1.15 oxidoreductase acting on superoxide as acceptor... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001424 SOD_Cu_Zn_dom 18 158
No external refs found!