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  5. LOC_Os03g11734.2

LOC_Os03g11734.2 (LOC_Os03g11734)


Aliases : LOC_Os03g11734

Description : metal-citrate complex transporter (FRD). ferric-citrate complex transporter (FRD)


Gene families : OG0000980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g11734.2
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G51340 No alias MATE efflux family protein 0.05 OrthoFinder output from all 47 species
AT3G08040 MAN1, ATFRD3, FRD3 MATE efflux family protein 0.02 OrthoFinder output from all 47 species
Aob_g05997 No alias ferric-citrate complex transporter *(FRD) & original... 0.03 OrthoFinder output from all 47 species
Aop_g11885 No alias ferric-citrate complex transporter *(FRD) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z024500.1 Ceric.1Z024500 ferric-citrate complex transporter *(FRD) & original... 0.06 OrthoFinder output from all 47 species
Dac_g15647 No alias ferric-citrate complex transporter *(FRD) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01025266001 No alias Nutrient uptake.iron uptake.long-distance iron... 0.03 OrthoFinder output from all 47 species
GSVIVT01032091001 No alias Nutrient uptake.iron uptake.long-distance iron... 0.03 OrthoFinder output from all 47 species
GSVIVT01033317001 No alias Nutrient uptake.iron uptake.long-distance iron... 0.02 OrthoFinder output from all 47 species
MA_10437152g0010 No alias metal-citrate complex transporter (FRD) 0.02 OrthoFinder output from all 47 species
MA_138630g0010 No alias metal-citrate complex transporter (FRD) 0.02 OrthoFinder output from all 47 species
MA_3055g0010 No alias metal-citrate complex transporter (FRD) 0.02 OrthoFinder output from all 47 species
Msp_g21243 No alias ferric-citrate complex transporter *(FRD) & original... 0.03 OrthoFinder output from all 47 species
Msp_g38620 No alias ferric-citrate complex transporter *(FRD) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g03704 No alias ferric-citrate complex transporter *(FRD) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g39101 No alias ferric-citrate complex transporter *(FRD) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g20470 No alias ferric-citrate complex transporter *(FRD) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g087150.3.1 Solyc01g087150 metal-citrate complex transporter (FRD). ferric-citrate... 0.07 OrthoFinder output from all 47 species
Solyc11g065820.3.1 Solyc11g065820 metabolite transporter (DTX). metal-citrate complex... 0.02 OrthoFinder output from all 47 species
Spa_g23114 No alias ferric-citrate complex transporter *(FRD) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e000857_P003 Zm00001e000857 metal-citrate complex transporter (FRD). ferric-citrate... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 375 526
IPR002528 MATE_fam 222 314
No external refs found!