Aliases : LOC_Os03g11580
Description : no hits & (original description: none)
Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g11580.1 | |
Cluster | HCCA: Cluster_65 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00110320 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | OrthoFinder output from all 47 species | |
AT3G18640 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g051625 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g113323 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g33431 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g38718 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
Als_g05138 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
Als_g27332 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g22679 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g31626 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene04156.t1 | Aspi01Gene04156 | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene22257.t1 | Aspi01Gene22257 | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0076.g037825 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g12381 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g29388 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g16623 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008114001 | No alias | Zinc finger CCCH domain-containing protein 38... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010035001 | ACCD | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.05 | OrthoFinder output from all 47 species | |
Gb_19122 | No alias | C3H zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Gb_26302 | No alias | C3H zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05738 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g29094 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g04479 | No alias | component *(FES1) of FRI-C transcription effector... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g08246 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g37073 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g61674 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g11003 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0038.g011981 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g37824 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39875 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g064800.4.1 | Solyc04g064800 | C3H zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g069440.3.1 | Solyc06g069440 | Zinc finger CCCH domain-containing protein 38... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g17866 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g41981 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10851 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g26553 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e032035_P001 | FES1, Zm00001e032035 | C3H zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |