1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g11400.1

LOC_Os03g11400.1 (LOC_Os03g11400)


Aliases : LOC_Os03g11400

Description : no hits & (original description: none)


Gene families : OG0003649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003649_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g11400.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00070440 evm_27.TU.AmTr_v1... No description available 0.17 OrthoFinder output from all 47 species
AT5G15510 No alias TPX2 (targeting protein for Xklp2) protein family 0.09 OrthoFinder output from all 47 species
Adi_g080102 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g15651 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g15652 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Aob_g32505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene04620.t1 Aspi01Gene04620 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene08613.t1 Aspi01Gene08613 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.02G078000.1 Ceric.02G078000 not classified & original description: pacid=50583911... 0.08 OrthoFinder output from all 47 species
Ceric.10G034200.1 Ceric.10G034200 not classified & original description: pacid=50612324... 0.2 OrthoFinder output from all 47 species
Dcu_g10790 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01011508001 No alias No description available 0.38 OrthoFinder output from all 47 species
GSVIVT01026314001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00785 No alias no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Len_g15527 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g27421 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
MA_10324352g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8291g0010 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Mp1g24770.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp3g08770.1 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Msp_g14117 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28682 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g29711 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Ppi_g17903 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc02g066980.1.1 Solyc02g066980 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc02g067100.3.1 Solyc02g067100 no hits & (original description: none) 0.26 OrthoFinder output from all 47 species
Solyc04g014550.3.1 Solyc04g014550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g51324 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Tin_g44369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000831_P002 Zm00001e000831 no hits & (original description: none) 0.23 OrthoFinder output from all 47 species
Zm00001e038734_P002 Zm00001e038734 no hits & (original description: none) 0.25 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 192 248
No external refs found!