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Aliases : PRP39, LOC_Os03g11200
Description : pre-mRNA-processing protein (PRP39)
Gene families : OG0002297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g11200.1 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00226980 | PRP39,... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00179p00033790 | AT PRP39-2,... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g019406 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059074 | AT PRP39-2, PRP39-2 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g12464 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12647 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g16599 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g37742 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g73033 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G096600.1 | PRP39, Ceric.04G096600 | pre-mRNA-processing protein *(PRP39) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020911.47 | PRP39 | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g15145 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11777 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09806 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021383001 | AT PRP39-2, PRP39-2 | No description available | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01028421001 | PRP39 | No description available | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028422001 | PRP39 | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Gb_37983 | PRP39 | pre-mRNA-processing protein (PRP39) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37984 | PRP39 | pre-mRNA-processing protein (PRP39) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g23571 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19659 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_6626g0010 | PRP39 | pre-mRNA-processing protein (PRP39) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10295 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06717 | AT PRP39-2, PRP39-2 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29159 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005318 | PRP39 | pre-mRNA-processing protein *(PRP39) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18657 | No alias | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g50656 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g03914 | AT PRP39-2, PRP39-2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g38613 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56288 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g19871 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000702_P004 | PRP39, Zm00001e000702 | pre-mRNA-processing protein (PRP39) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0016459 | myosin complex | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |