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  5. LOC_Os03g10980.1

LOC_Os03g10980.1 (LOC_Os03g10980)


Aliases : LOC_Os03g10980

Description : no hits & (original description: none)


Gene families : OG0001892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10980.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272520 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G50030 No alias ARM-repeat/Tetratricopeptide repeat (TPR)-like protein 0.06 OrthoFinder output from all 47 species
Aev_g01368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17576 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60265.t1 Aspi01Gene60265 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g06774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000164001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01009381001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g22878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_34668g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g11230.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g078170.2.1 Solyc04g078170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e000721_P001 Zm00001e000721 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!