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  5. LOC_Os03g08930.1

LOC_Os03g08930.1 (LOC_Os03g08930)


Aliases : LOC_Os03g08930

Description : transcription factor (bHLH)


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08930.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Aob_g27262 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60129.t1 FMA, Aspi01Gene60129 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G023000.1 FMA, Ceric.17G023000 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.26G015300.1 Ceric.26G015300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g02905 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03257 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37122 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_686524g0010 FMA transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Pnu_g33721 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g010340.2.1 Solyc11g010340 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Tin_g07072 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014279_P001 SPCH, Zm00001e014279 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e023838_P003 Zm00001e023838 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034422_P002 Zm00001e034422 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e037075_P001 SPCH, Zm00001e037075 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 109 160
No external refs found!