LOC_Os03g08860.1 (FIP1, LOC_Os03g08860)


Aliases : FIP1, LOC_Os03g08860

Description : GEM-like protein 1 OS=Arabidopsis thaliana (sp|q9se96|geml1_arath : 276.0)


Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08860.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT5G13200 No alias GRAM domain family protein 0.05 OrthoFinder output from all 47 species
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 OrthoFinder output from all 47 species
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 OrthoFinder output from all 47 species
Adi_g006517 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46794.t1 FIP1, Aspi01Gene46794 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11079 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010252001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01012919001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033015001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_14979 GEM GEM-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g42440.1 LOC_Os02g42440 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g08110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10147276g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g04702 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002528 FIP1 not classified & original description: CDS=29-898 0.02 OrthoFinder output from all 47 species
Solyc03g098660.3.1 Solyc03g098660 GEM-like protein 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc08g078510.3.1 Solyc08g078510 GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g05448 FIP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05449 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20230 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023068_P001 Zm00001e023068 GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039556_P001 Zm00001e039556 GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e041280_P002 Zm00001e041280 GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041281_P001 Zm00001e041281 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 141 259
No external refs found!