LOC_Os03g08810.1 (LOC_Os03g08810)


Aliases : LOC_Os03g08810

Description : Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana (sp|q8l557|em514_arath : 154.0)


Gene families : OG0001145 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001145_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08810.1

Target Alias Description ECC score Gene Family Method Actions
AT5G62440 No alias Protein of unknown function (DUF3223) 0.04 OrthoFinder output from all 47 species
Aop_g07808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G044700.1 Ceric.04G044700 not classified & original description: pacid=50632335... 0.03 OrthoFinder output from all 47 species
MA_77759g0010 No alias Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g13022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011095 No alias not classified & original description: CDS=169-912 0.04 OrthoFinder output from all 47 species
Sam_g10978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g116020.3.1 Solyc03g116020 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g10429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000643_P001 Zm00001e000643 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e038843_P001 Zm00001e038843 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!