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  5. LOC_Os03g08310.1

LOC_Os03g08310.1 (LOC_Os03g08310)


Aliases : LOC_Os03g08310

Description : transcription factor (TIFY)


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08310.1

Target Alias Description ECC score Gene Family Method Actions
AT1G17380 TIFY11A, JAZ5 jasmonate-zim-domain protein 5 0.02 OrthoFinder output from all 47 species
Adi_g071330 No alias TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02768 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12084 TIFY10A, JAZ1 TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10901.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10902.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene26817.t1 TIFY10B, JAZ2,... TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26946.t1 TIFY10B, JAZ2,... TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27117.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67664.t1 JAI3, JAZ3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g28529 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02892 PPD2, TIFY4B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03629 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g07502 TIFY10B, JAZ2 TIFY-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os07g42370.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.02 OrthoFinder output from all 47 species
MA_1854g0020 TIFY10B, JAZ2 transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Mp6g06230.1 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.01 OrthoFinder output from all 47 species
Tin_g24634 No alias TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000590_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 66 96
IPR018467 CCT_CS 115 140
No external refs found!