LOC_Os03g07400.1 (LOC_Os03g07400)


Aliases : LOC_Os03g07400

Description : no hits & (original description: none)


Gene families : OG0005222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005222_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07400.1

Target Alias Description ECC score Gene Family Method Actions
AT2G35290 No alias unknown protein; Has 39 Blast hits to 39 proteins in 10... 0.06 OrthoFinder output from all 47 species
Ala_g08998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G049400.1 Ceric.21G049400 not classified & original description: pacid=50602938... 0.07 OrthoFinder output from all 47 species
Dac_g08998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02032 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os12g25770.1 LOC_Os12g25770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g00139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g05881 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g01654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g077020.1.1 Solyc08g077020 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!