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  5. LOC_Os03g07200.1

LOC_Os03g07200.1 (LOC_Os03g07200)


Aliases : LOC_Os03g07200

Description : no hits & (original description: none)


Gene families : OG0008127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07200.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT5G39520 No alias Protein of unknown function (DUF1997) 0.07 OrthoFinder output from all 47 species
Ehy_g04370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g067120.4.1 Solyc02g067120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g088270.3.1 Solyc02g088270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g15127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018971 DUF1997 102 301
No external refs found!