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  5. LOC_Os03g06940.1

LOC_Os03g06940.1 (BGAL3, LOC_Os03g06940)


Aliases : BGAL3, LOC_Os03g06940

Description : beta-galactosidase (BGAL)


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06940.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00032740 BGAL8,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AT2G28470 BGAL8 beta-galactosidase 8 0.03 OrthoFinder output from all 47 species
AT2G32810 BGAL9 beta galactosidase 9 0.04 OrthoFinder output from all 47 species
AT3G13750 BGAL1 beta galactosidase 1 0.02 OrthoFinder output from all 47 species
AT4G36360 BGAL3 beta-galactosidase 3 0.03 OrthoFinder output from all 47 species
Aev_g16615 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44850 BGAL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27601 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28359.t1 BGAL8, Aspi01Gene28359 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28377.t1 BGAL1, Aspi01Gene28377 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0174.g055941 BGAL8 EC_3.2 glycosylase & original description: CDS=223-2676 0.03 OrthoFinder output from all 47 species
Dac_g09601 BGAL8 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12366 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12016 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05067 BGAL9 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024221001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.07 OrthoFinder output from all 47 species
GSVIVT01025170001 BGAL8 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
Gb_41532 BGAL10 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g12730.1 BGAL1, LOC_Os02g12730 beta-galactosidase (BGAL) 0.06 OrthoFinder output from all 47 species
Lfl_g17313 BGAL1 EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
MA_10427427g0010 BGAL1 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
MA_168609g0010 BGAL12 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Mp4g01390.1 BGAL8 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Nbi_g04951 BGAL1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12468 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002148 BGAL12 EC_3.2 glycosylase & original description: CDS=1-939 0.02 OrthoFinder output from all 47 species
Sam_g25743 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26543 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g111540.4.1 BGAL13, Solyc01g111540 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Solyc02g078950.4.1 BGAL8, Solyc02g078950 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
Solyc02g084720.3.1 BGAL3, Solyc02g084720 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Solyc03g019890.3.1 BGAL10, Solyc03g019890 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Solyc04g080840.3.1 BGAL5, Solyc04g080840 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Solyc07g042220.2.1 BGAL15, Solyc07g042220 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Solyc10g055470.2.1 BGAL13, Solyc10g055470 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Solyc12g044880.2.1 BGAL1, Solyc12g044880 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Spa_g02223 BGAL1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10280 BGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000496_P002 BGAL3, Zm00001e000496 beta-galactosidase (BGAL) 0.1 OrthoFinder output from all 47 species
Zm00001e010258_P001 BGAL11, Zm00001e010258 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e020528_P001 BGAL1, Zm00001e020528 beta-galactosidase (BGAL) 0.05 OrthoFinder output from all 47 species
Zm00001e024944_P002 BGAL1, Zm00001e024944 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e035986_P002 BGAL11, Zm00001e035986 beta-galactosidase (BGAL) 0.07 OrthoFinder output from all 47 species
Zm00001e039014_P001 BGAL3, Zm00001e039014 beta-galactosidase (BGAL) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041392 GHD 346 416
IPR031330 Gly_Hdrlase_35_cat 34 338
IPR000922 Lectin_gal-bd_dom 760 837
No external refs found!