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  5. LOC_Os03g06160.1

LOC_Os03g06160.1 (FIP2, LOC_Os03g06160)


Aliases : FIP2, LOC_Os03g06160

Description : FH protein interacting protein FIP2 OS=Arabidopsis thaliana (sp|q9se95|fip2_arath : 314.0)


Gene families : OG0004141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06160.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT5G55000 FIP2 potassium channel tetramerisation domain-containing... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000523.40 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000802.23 No alias FH protein interacting protein FIP2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0051260 protein homooligomerization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0097354 prenylation IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 138 174
IPR001646 5peptide_repeat 241 279
IPR001646 5peptide_repeat 186 225
IPR003131 T1-type_BTB 13 100
No external refs found!